miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|33503379|gb|BX613492.1|BX613492 CACCAACACCAGTATGACCGGTCGCGGCAAGGGAGGCAAGGGACTGGGAAAGGGAGGAGCCAAGCGTCATCGCAAGGTGC
TGCGCGATAACATCCAGGGCATCACCAAGCCCGCCATCCGCCGTCTGGCTCGCCGTGGCGGCGTGAAGCGTATCTCCGGC
CTGATCTACGAAGAGACGCGCGGTGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGCGATGCGGTCACCTACACCGAGCA
CGCCAAGCGCAAGACGGTCACGGCGATGGATGTGGTGTACGCTCTGAAGCGCCAGGGCCGTACGCTCTACGGATTCGGAG
GTTAAGAAGTTTGCTGTGTGCTATTGCGCGTCCGCGTGTGTGTGTGTGTGCATGTGCCCAGTCGCGGGACCGTGTGCGCC
GCACGCGCCGTCGCCATCACCCCTCGCTCATCTCGAAACCACCACGGATCATCGGCATACAAGAAAAACGGCCCTTTTCA
GGGCCACTGATTGAATTGCAGTAAAAAGAACTTCTCTATCGTTCATTCCAATTGGTTCAAAAGGGGGGTTGTGTGTTCAT
ATTCATTGTTTTATTACAGCCACATCGCCGGTGAAGGTGATGCTAATATTCGCAAGCCATTTTTGGTTTGTGCAAAGATG
GCGGCGAAAGCGTCATGTCTTGCTTGGGAGGAGAAAATTCTGATACACACTCTCATCTATAGCTACGTATAAGTGTGTGT
GTGAAAGGCTTCAGCGAAGACTGGAAAAAACAGCATCATCGCTTGCTCTTTTACAGCGGTCCTGTTTGCATTTGTCCCTT
TAATTTATTCAGTTCATTTTAAATAAAGCGCCAATCATACAAAG




Most similar to sp|Q28DR4|H4_XENTR

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q28DR4|H4_XENTR Histone H4 OS=Xenopus tropicalis GN=TGas006m08.1
           PE=3 SV=1
          Length = 103

 Score =  162 bits (410), Expect = 3e-39
 Identities = 82/82 (100%), Positives = 82/82 (100%)
 Frame = +2

Query: 77  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 256
           VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT
Sbjct: 22  VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKT 81

Query: 257 VTAMDVVYALKRQGRTLYGFGG 322
           VTAMDVVYALKRQGRTLYGFGG
Sbjct: 82  VTAMDVVYALKRQGRTLYGFGG 103